Reference code: | PT/FB/BL-2010-161.05 |
Location: | Arquivo PCA - Pastas 22/2010
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Title:
| An interactive time series image analysis software for dendritic spines
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Publication year: | 2022
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URL:
| https://www.nature.com/articles/s41598-022-16137-y
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Abstract/Results: | Abstract
Live fluorescence imaging has demonstrated the dynamic nature of dendritic spines, with changes in shape occurring both during development and in response to activity. The structure of a dendritic spine correlates with its functional efficacy. Learning and memory studies have shown that a great deal of the information stored by a neuron is contained in the synapses. High precision tracking of synaptic structures can give hints about the dynamic nature of memory and help us understand how memories evolve both in biological and artificial neural networks. Experiments that aim to investigate the dynamics behind the structural changes of dendritic spines require the collection and analysis of large time-series datasets. In this paper, we present an open-source software called SpineS for automatic longitudinal structural analysis of dendritic spines with additional features for manual intervention to ensure optimal analysis. We have tested the algorithm on in-vitro, in-vivo, and simulated datasets to demonstrate its performance in a wide range of possible experimental scenarios.
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Accessibility: | Document exists in file
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Language:
| eng
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Author:
| Argunsah, A. Ö.
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Secondary author(s):
| Erdil, E., Ghani, M. U., Ramiro-Cortés, Y., Hobbiss, A., Karayannis, T., Çetin, M., Israely, I., Ünay, D.
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Document type:
| Article
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Number of reproductions:
| 1
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Percentiles:
| 6
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Reference:
| Argunsah, A. Ö., Erdil, E., Ghani, M. U., Ramiro-Cortés, Y., Hobbiss, A., Karayannis, T., Çetin, M., Israely, I., & Ünay, D. (2022). An interactive time series image analysis software for dendritic spines. Scientific Reports, 12(1), 12405. https://doi.org/10.1038/s41598-022-16137-y
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2-year Impact Factor: | 4.600|2022
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Times cited: | 3|2024-02-15
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Indexed document: | Yes
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Quartile: | Q2
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Keywords: | Dendritic spines / Functional efficacy / Synapses
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An interactive time series image analysis software for dendritic spines |